
The paper Ancestry and Pathology in King Tutankhamun's Family by Hawass al. (Journal of American Medicine, 2010 - JAMA. 2010;303(7):638-647), states that the mummy in KV55 is “probably” Akhenaten, although the attribution has attracted considerable comment and debate with a number of writers questioning the forensic data.
In the JAMA paper, Hawass et al. outline what they see as the most likely 5-generational family tree including the identification of the KV55 mummy and KV35YL as full siblings. I accept the family tree with the exception of the sibling identification which I believe should be questioned and the identification of Akhenaten.

Go to http://www.kv64.info/2010/03/dna-shows-that-kv55-mummy-probably-not.html for the rest of the discussion.
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